Объединение нескольких методов извлечения признаков

Во многих реальных примерах существует множество способов извлечения признаков из набора данных. Часто полезно комбинировать несколько методов для достижения хорошей производительности. Этот пример показывает, как использовать FeatureUnion для объединения признаков, полученных с помощью PCA и одномерного отбора.

Объединение признаков с помощью этого преобразователя имеет преимущество, заключающееся в том, что оно позволяет проводить перекрестную проверку и поиск по сетке параметров для всего процесса.

Комбинация, использованная в этом примере, не особенно полезна для этого набора данных и используется только для иллюстрации использования FeatureUnion.

Combined space has 3 features
Fitting 5 folds for each of 18 candidates, totalling 90 fits
[CV 1/5; 1/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1
[CV 1/5; 1/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 2/5; 1/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1
[CV 2/5; 1/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 3/5; 1/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1
[CV 3/5; 1/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1;, score=0.867 total time=   0.0s
[CV 4/5; 1/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1
[CV 4/5; 1/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 5/5; 1/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1
[CV 5/5; 1/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 1/5; 2/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=1
[CV 1/5; 2/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=1;, score=0.900 total time=   0.0s
[CV 2/5; 2/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=1
[CV 2/5; 2/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=1;, score=1.000 total time=   0.0s
[CV 3/5; 2/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=1
[CV 3/5; 2/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=1;, score=0.867 total time=   0.0s
[CV 4/5; 2/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=1
[CV 4/5; 2/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=1;, score=0.933 total time=   0.0s
[CV 5/5; 2/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=1
[CV 5/5; 2/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=1;, score=1.000 total time=   0.0s
[CV 1/5; 3/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=10
[CV 1/5; 3/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=10;, score=0.933 total time=   0.0s
[CV 2/5; 3/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=10
[CV 2/5; 3/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=10;, score=1.000 total time=   0.0s
[CV 3/5; 3/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=10
[CV 3/5; 3/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=10;, score=0.900 total time=   0.0s
[CV 4/5; 3/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=10
[CV 4/5; 3/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=10;, score=0.933 total time=   0.0s
[CV 5/5; 3/18] START features__pca__n_components=1, features__univ_select__k=1, svm__C=10
[CV 5/5; 3/18] END features__pca__n_components=1, features__univ_select__k=1, svm__C=10;, score=1.000 total time=   0.0s
[CV 1/5; 4/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1
[CV 1/5; 4/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 2/5; 4/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1
[CV 2/5; 4/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1;, score=0.967 total time=   0.0s
[CV 3/5; 4/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1
[CV 3/5; 4/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 4/5; 4/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1
[CV 4/5; 4/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 5/5; 4/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1
[CV 5/5; 4/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 1/5; 5/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=1
[CV 1/5; 5/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=1;, score=0.933 total time=   0.0s
[CV 2/5; 5/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=1
[CV 2/5; 5/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=1;, score=0.967 total time=   0.0s
[CV 3/5; 5/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=1
[CV 3/5; 5/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=1;, score=0.933 total time=   0.0s
[CV 4/5; 5/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=1
[CV 4/5; 5/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=1;, score=0.933 total time=   0.0s
[CV 5/5; 5/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=1
[CV 5/5; 5/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=1;, score=1.000 total time=   0.0s
[CV 1/5; 6/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=10
[CV 1/5; 6/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=10;, score=0.967 total time=   0.0s
[CV 2/5; 6/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=10
[CV 2/5; 6/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=10;, score=0.967 total time=   0.0s
[CV 3/5; 6/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=10
[CV 3/5; 6/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=10;, score=0.933 total time=   0.0s
[CV 4/5; 6/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=10
[CV 4/5; 6/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=10;, score=0.933 total time=   0.0s
[CV 5/5; 6/18] START features__pca__n_components=1, features__univ_select__k=2, svm__C=10
[CV 5/5; 6/18] END features__pca__n_components=1, features__univ_select__k=2, svm__C=10;, score=1.000 total time=   0.0s
[CV 1/5; 7/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1
[CV 1/5; 7/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 2/5; 7/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1
[CV 2/5; 7/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 3/5; 7/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1
[CV 3/5; 7/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1;, score=0.867 total time=   0.0s
[CV 4/5; 7/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1
[CV 4/5; 7/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 5/5; 7/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1
[CV 5/5; 7/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 1/5; 8/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=1
[CV 1/5; 8/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=1;, score=0.967 total time=   0.0s
[CV 2/5; 8/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=1
[CV 2/5; 8/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=1;, score=1.000 total time=   0.0s
[CV 3/5; 8/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=1
[CV 3/5; 8/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=1;, score=0.933 total time=   0.0s
[CV 4/5; 8/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=1
[CV 4/5; 8/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=1;, score=0.933 total time=   0.0s
[CV 5/5; 8/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=1
[CV 5/5; 8/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=1;, score=1.000 total time=   0.0s
[CV 1/5; 9/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=10
[CV 1/5; 9/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=10;, score=0.967 total time=   0.0s
[CV 2/5; 9/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=10
[CV 2/5; 9/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=10;, score=0.967 total time=   0.0s
[CV 3/5; 9/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=10
[CV 3/5; 9/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=10;, score=0.900 total time=   0.0s
[CV 4/5; 9/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=10
[CV 4/5; 9/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=10;, score=0.933 total time=   0.0s
[CV 5/5; 9/18] START features__pca__n_components=2, features__univ_select__k=1, svm__C=10
[CV 5/5; 9/18] END features__pca__n_components=2, features__univ_select__k=1, svm__C=10;, score=1.000 total time=   0.0s
[CV 1/5; 10/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1
[CV 1/5; 10/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1;, score=0.967 total time=   0.0s
[CV 2/5; 10/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1
[CV 2/5; 10/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 3/5; 10/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1
[CV 3/5; 10/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 4/5; 10/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1
[CV 4/5; 10/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 5/5; 10/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1
[CV 5/5; 10/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 1/5; 11/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=1
[CV 1/5; 11/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=1;, score=0.967 total time=   0.0s
[CV 2/5; 11/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=1
[CV 2/5; 11/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=1;, score=1.000 total time=   0.0s
[CV 3/5; 11/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=1
[CV 3/5; 11/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=1;, score=0.933 total time=   0.0s
[CV 4/5; 11/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=1
[CV 4/5; 11/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=1;, score=0.967 total time=   0.0s
[CV 5/5; 11/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=1
[CV 5/5; 11/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=1;, score=1.000 total time=   0.0s
[CV 1/5; 12/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=10
[CV 1/5; 12/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=10;, score=0.967 total time=   0.0s
[CV 2/5; 12/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=10
[CV 2/5; 12/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=10;, score=1.000 total time=   0.0s
[CV 3/5; 12/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=10
[CV 3/5; 12/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=10;, score=0.900 total time=   0.0s
[CV 4/5; 12/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=10
[CV 4/5; 12/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=10;, score=0.933 total time=   0.0s
[CV 5/5; 12/18] START features__pca__n_components=2, features__univ_select__k=2, svm__C=10
[CV 5/5; 12/18] END features__pca__n_components=2, features__univ_select__k=2, svm__C=10;, score=1.000 total time=   0.0s
[CV 1/5; 13/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1
[CV 1/5; 13/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1;, score=0.967 total time=   0.0s
[CV 2/5; 13/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1
[CV 2/5; 13/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 3/5; 13/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1
[CV 3/5; 13/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 4/5; 13/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1
[CV 4/5; 13/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1;, score=0.967 total time=   0.0s
[CV 5/5; 13/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1
[CV 5/5; 13/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 1/5; 14/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=1
[CV 1/5; 14/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=1;, score=0.967 total time=   0.0s
[CV 2/5; 14/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=1
[CV 2/5; 14/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=1;, score=1.000 total time=   0.0s
[CV 3/5; 14/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=1
[CV 3/5; 14/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=1;, score=0.933 total time=   0.0s
[CV 4/5; 14/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=1
[CV 4/5; 14/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=1;, score=0.967 total time=   0.0s
[CV 5/5; 14/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=1
[CV 5/5; 14/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=1;, score=1.000 total time=   0.0s
[CV 1/5; 15/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=10
[CV 1/5; 15/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=10;, score=1.000 total time=   0.0s
[CV 2/5; 15/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=10
[CV 2/5; 15/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=10;, score=1.000 total time=   0.0s
[CV 3/5; 15/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=10
[CV 3/5; 15/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=10;, score=0.933 total time=   0.0s
[CV 4/5; 15/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=10
[CV 4/5; 15/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=10;, score=0.967 total time=   0.0s
[CV 5/5; 15/18] START features__pca__n_components=3, features__univ_select__k=1, svm__C=10
[CV 5/5; 15/18] END features__pca__n_components=3, features__univ_select__k=1, svm__C=10;, score=1.000 total time=   0.0s
[CV 1/5; 16/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1
[CV 1/5; 16/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1;, score=0.967 total time=   0.0s
[CV 2/5; 16/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1
[CV 2/5; 16/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 3/5; 16/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1
[CV 3/5; 16/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1;, score=0.933 total time=   0.0s
[CV 4/5; 16/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1
[CV 4/5; 16/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1;, score=0.967 total time=   0.0s
[CV 5/5; 16/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1
[CV 5/5; 16/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=0.1;, score=1.000 total time=   0.0s
[CV 1/5; 17/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=1
[CV 1/5; 17/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=1;, score=0.967 total time=   0.0s
[CV 2/5; 17/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=1
[CV 2/5; 17/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=1;, score=1.000 total time=   0.0s
[CV 3/5; 17/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=1
[CV 3/5; 17/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=1;, score=0.967 total time=   0.0s
[CV 4/5; 17/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=1
[CV 4/5; 17/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=1;, score=0.967 total time=   0.0s
[CV 5/5; 17/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=1
[CV 5/5; 17/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=1;, score=1.000 total time=   0.0s
[CV 1/5; 18/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=10
[CV 1/5; 18/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=10;, score=1.000 total time=   0.0s
[CV 2/5; 18/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=10
[CV 2/5; 18/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=10;, score=1.000 total time=   0.0s
[CV 3/5; 18/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=10
[CV 3/5; 18/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=10;, score=0.900 total time=   0.0s
[CV 4/5; 18/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=10
[CV 4/5; 18/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=10;, score=0.967 total time=   0.0s
[CV 5/5; 18/18] START features__pca__n_components=3, features__univ_select__k=2, svm__C=10
[CV 5/5; 18/18] END features__pca__n_components=3, features__univ_select__k=2, svm__C=10;, score=1.000 total time=   0.0s
Pipeline(steps=[('features',
                 FeatureUnion(transformer_list=[('pca', PCA(n_components=3)),
                                                ('univ_select',
                                                 SelectKBest(k=1))])),
                ('svm', SVC(C=10, kernel='linear'))])

# Authors: The scikit-learn developers
# SPDX-License-Identifier: BSD-3-Clause

from sklearn.datasets import load_iris
from sklearn.decomposition import PCA
from sklearn.feature_selection import SelectKBest
from sklearn.model_selection import GridSearchCV
from sklearn.pipeline import FeatureUnion, Pipeline
from sklearn.svm import SVC

iris = load_iris()

X, y = iris.data, iris.target

# This dataset is way too high-dimensional. Better do PCA:
pca = PCA(n_components=2)

# Maybe some original features were good, too?
selection = SelectKBest(k=1)

# Build estimator from PCA and Univariate selection:

combined_features = FeatureUnion([("pca", pca), ("univ_select", selection)])

# Use combined features to transform dataset:
X_features = combined_features.fit(X, y).transform(X)
print("Combined space has", X_features.shape[1], "features")

svm = SVC(kernel="linear")

# Do grid search over k, n_components and C:

pipeline = Pipeline([("features", combined_features), ("svm", svm)])

param_grid = dict(
    features__pca__n_components=[1, 2, 3],
    features__univ_select__k=[1, 2],
    svm__C=[0.1, 1, 10],
)

grid_search = GridSearchCV(pipeline, param_grid=param_grid, verbose=10)
grid_search.fit(X, y)
print(grid_search.best_estimator_)

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Построение различных классификаторов SVM на наборе данных iris

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